Browse of TCMCG007C09068 protein

CDS

Accession Number	TCMCG007C09068
gbkey	CDS
Protein Id	XP_033134697.1
Location	complement(join(24224776..24224842,24224960..24225049,24225124..24225195,24225303..24225376,24225471..24225551,24225657..24225746,24225825..24225995,24226143..24226209,24226321..24226388,24226583..24226681,24226805..24226930,24227020..24227160,24227344..24227430,24227528..24227611,24227708..24227848,24228018..24228114,24228244..24228539,24228647..24228765,24228894..24228975,24229081..24229263,24229448..24229630,24229759..24229939,24230029..24230140,24230757..24230805))
Gene	LOC103839698
GeneID	103839698
Organism	Brassica rapa

Protein

Length	919aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_033278806.1
Definition	E3 ubiquitin-protein ligase UPL6 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Ubiquitin-protein ligase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K10589        [VIEW IN KEGG]
EC	2.3.2.26        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04120        [VIEW IN KEGG] map04120        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004842        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006464        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016567        [VIEW IN EMBL-EBI] GO:0016740        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019787        [VIEW IN EMBL-EBI] GO:0032446        [VIEW IN EMBL-EBI] GO:0036211        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044267        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0061630        [VIEW IN EMBL-EBI] GO:0061659        [VIEW IN EMBL-EBI] GO:0070647        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCTTGTGGAGACGTGTCGTCTACTGCGAAAGTTTGCCCACAGCAGTGGGGACATTCTAAGCCTTTTCTCTGGCTTGGACTACTCTAGTGAGCATAATATGGTGGATTTTAGAGTAAAGAAACTTGCATTTACCTGCATCGAGGCTATACATCAGAATAGGGATCGTTTGAGGGATCAGCTCTTAGTTACTCCCGAAGAAGCTACCATTTCAACAGCTATCTTGATGGATGCGATGTCGTTGTTGCTAGATCCTAAGCTGCCTTGGGTTTGCAAAATAGTTAGCTATCTACAGAAAAGAAACATATTCAAACTGGTCCGAGAAATTGTGACTACGGCTAAGGAAGGCTCAAGAAGTCCGACTATGAACGGCAGCATCCTTTCACTAGAAAGTGTATTGTTTCTGGTAGTACCACACGTTGGCCGTGAGCCATGTTGCTGCCCTGTTGTTGATCCACGTTGGAGTTTCTCATCTATGATCCTTACCATACCCTTTATATGGCAGCTCTTCCCAAACTTGAAAGTGGTCTTTGCTAACCCAAGTCTAAGTCAACACTACGTTCACCAGATGGCTTTATGTATCCAAAAGGATACCCATGTTCTCCCAATAGATACAAACACAGAATTTCCTGGTAATGCTTGTCTTCTTGGTAATACATTGGAAATTGCAAACGTGGTCTTGTCACAGCCTGAATGTTCATTGGACATGGCAATTGACATTGCATCAGTTGCAACTTTCTTATTGGAGACACTTCCTCCTATTAAGTCATCAGAAAGAGAAAGCAGACATAGCTCTTCTGAAGAGGATGATGATATGTTGATTGACGATGTACAAGAATTAGTCTTGAATAGGACTTTGGAGCAGCAGATAACTACCAATGCTATAGACTCACGTTTTCTTCTGCAGTTAACAAATATTTTGTTCCATCAAGTTTCGGGTGGTACGCAGTCATATGACGAAGATAAAGAAGCACTAGCTATTGCCACAGGCAGTTCTTTTCTGTATGCGGCATTCAACATTCTCCCTCTTGAGCGAATAATGACAGTTTTGGCTTATAGAACCGAGCTTGTAGCTGTGTTGTGGAATTATATGAAGCGATGCCATGAGAACCAGAAGTGGTCATCCATGCCTAGTGTCCTAGCTTATCTTCCAGCGGATTCCCCGGGTTGGCTATTACCTCTGGTTGTCTTTTGTCCTGTTTATAAGCATATGCTTACGATTGTCGATAATGAGGAATTTTACGAACGAGGAAAGCCACTATCGCTACAAGATATCAGGTTGCTCATCATCATTCTCAAGCAAGCTTTATGGCAGTTACTGTGGGTGAATCCACTTACGCAACATAACTCTGGGATATCTGTCTCCAACGACCTCTCAAAGAAGAACCGTGTTGACTTAATTCAGAACAGGGTTGGGGTTGTAATCGCTGAGTTACTTTCACAGTTTCAAGATTGGAACAACCGGCAACAATTCACTTCCTCGACCGACTTTCAAGCTGATACAGTCAGTGAATATTTTATCACTCAGGCTATAGTGGAAGGTACAAGAGCCAGCTACATACTGATGCAGGCTCCTTTCCTGATTCCGTTTACAAGCAGAGTCAAAATATTCACAACACAATTAGCAACGGCGAGGCAGAGTCATGGATCTGAAGAAATTTTTGCTGGAAATCGGTTTAGAATACGAAGAGATCACATCTTGGATGATGCTTACAATCAAATGAGTGCATTGTCAGAGGATGATCTCCGAGGACCAATTCGTGTGACGTTTGTCAATGAACTCGGAGTTGAGGAAGCCGGTATTGATGGTGGTGGCATTTTCAAAGACTTTATGGAGAAAATTACCCTAGCAGCCTTTGATGTGCAATATGGGTTGTTTAAGGAAACCGTTGATCACATGCTTTATCCTAATCCTGGATCAGGAATGATACATGGACAGCATCTCCAGTTCTTTCATTTTCTCGGCAGTCTTCTCGCAAAAGCTATGTTTGAAGGGATTCTAGTTGATTTACCATTTGCAACGTTTTTCCTCAGCAAATTGAAACAAAAGTACAACTATTTGAACGATCTACCCTCTCTGGATCCTGAGTTGTATCGGCATCTTATATTTCTGAAGCGTTATAAGGGCGATATATCAGACTTGGAGCTTTACTTTGTTATTCTGAACAATGAATATGGAGAGAGAACAGAGGAAGAGCTACTTCCAGGGGGCAAAGACATGCGAGTCACAAATAAAAATGTTATAACTTTCATTCATCTGGTTTCCAATCATCGGCTAAACTTTCAGATACGCCAGCAGAGTTCTCATTTCTTGAGGGGGTTTCAGCAACTCATTCCGAGAGAATGGATAGACATGTTCAATGAACATGAGCTCCAGGTTCTCATATCTGGTTCAGCTGATAGTTTGGATATTGACGACTTGCGAGAGAACACCAATTATTCTGGAGGCTACAACGCTGGACATTATGTGATTGATATGTTCTGGGAAGTAATGAAAAGCTTCTCAACAGAAAACCAGAAGAAGTTCTTGAAATTTGTAACGGGCTGTTCAAGAGGACCACTGCTCGGTTTCAAGTACTTGGAACCTGCGTTCTGTATACAGAGGGCTGGTGGTAGCGTGAGTAATGAAGCAGTTGATAGACTACCGACATCAGCCACTTGTATGAACCTTCTTAAGCTTCCACCCTATCAAAGCAAAGAGCAACTTGAGACCAAATTGATGTACGCCATAAGCGCAGAAGCAGGCTTTGATCTGAGCTGA

Protein:   MLVETCRLLRKFAHSSGDILSLFSGLDYSSEHNMVDFRVKKLAFTCIEAIHQNRDRLRDQLLVTPEEATISTAILMDAMSLLLDPKLPWVCKIVSYLQKRNIFKLVREIVTTAKEGSRSPTMNGSILSLESVLFLVVPHVGREPCCCPVVDPRWSFSSMILTIPFIWQLFPNLKVVFANPSLSQHYVHQMALCIQKDTHVLPIDTNTEFPGNACLLGNTLEIANVVLSQPECSLDMAIDIASVATFLLETLPPIKSSERESRHSSSEEDDDMLIDDVQELVLNRTLEQQITTNAIDSRFLLQLTNILFHQVSGGTQSYDEDKEALAIATGSSFLYAAFNILPLERIMTVLAYRTELVAVLWNYMKRCHENQKWSSMPSVLAYLPADSPGWLLPLVVFCPVYKHMLTIVDNEEFYERGKPLSLQDIRLLIIILKQALWQLLWVNPLTQHNSGISVSNDLSKKNRVDLIQNRVGVVIAELLSQFQDWNNRQQFTSSTDFQADTVSEYFITQAIVEGTRASYILMQAPFLIPFTSRVKIFTTQLATARQSHGSEEIFAGNRFRIRRDHILDDAYNQMSALSEDDLRGPIRVTFVNELGVEEAGIDGGGIFKDFMEKITLAAFDVQYGLFKETVDHMLYPNPGSGMIHGQHLQFFHFLGSLLAKAMFEGILVDLPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKRYKGDISDLELYFVILNNEYGERTEEELLPGGKDMRVTNKNVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPREWIDMFNEHELQVLISGSADSLDIDDLRENTNYSGGYNAGHYVIDMFWEVMKSFSTENQKKFLKFVTGCSRGPLLGFKYLEPAFCIQRAGGSVSNEAVDRLPTSATCMNLLKLPPYQSKEQLETKLMYAISAEAGFDLS